Question: Merging different VCF to discriminate samples.
0
gravatar for Picasa
3.0 years ago by
Picasa420
Picasa420 wrote:

Dear Biostars community.

I have 8 individuals from whom I run variant analysis (with GATK). So I have now 8 .vcf files.

These 8 individuals can be splitted into 2 groups and that's what I wanted to know.

Is there a way to merge the 8 .vcf files and to perform a kind of GWAS analysis to discriminate my samples ? Do you have any recommendation for a method ?

Thanks.

variant vcf • 882 views
ADD COMMENTlink written 3.0 years ago by Picasa420
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1724 users visited in the last hour