Question: ChIP data analysis high binding sites
1
gravatar for swadha
2.8 years ago by
swadha20
University of California, United States
swadha20 wrote:

I have ChIP-seq data and I have mapped it to the reference genome using Bowtie-2. How to find the genomic region that have high binding sites for histone in ChIP data? Which tool should I use to find the binding sites?

chip-seq • 948 views
ADD COMMENTlink written 2.8 years ago by swadha20
3

see here for peak calling https://github.com/crazyhottommy/ChIP-seq-analysis#peak-calling

ADD REPLYlink written 2.8 years ago by Ming Tang2.4k

This is best resource for ChIPseq data analysis by Tommy Tang

ADD REPLYlink written 2.8 years ago by Mike1.3k

Thanks !! It was a great help :)

ADD REPLYlink written 2.7 years ago by swadha20
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1003 users visited in the last hour