what is the multiplier from this "copy number variation" record
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Entering edit mode
7.8 years ago
solo7773 ▴ 90

I got a file containing copy number variation data, shown as following:

--------------------------- START SAMPLE -----------------------

Number,startchr,startpos,endpos,normMaj,normMin,nMajor,nMinor

1,1,61735,118884341,2,1,3,1

2,1,118884375,121482979,2,1,3,0

3,1,143982530,152555527,2,1,4,2

4,1,152555706,152586576,2,1,0,0

5,1,152586594,152759678,2,1,5,0

.

.

.

---------------------------- END SAMPLE ----------------------

Can anlybody tell what ploidy each record has? ie I need data like follows

--------------------- data I need START --------------------------

Number,startchr,startpos,endpos,multiplier

1,1,61735,118884341,?

2,1,118884375,121482979,?

3,1,143982530,152555527,?

4,1,152555706,152586576,?

5,1,152586594,152759678,?

---------------------------------- END ----------------------------------

Thanks!

cnv • 1.2k views
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Entering edit mode
7.8 years ago
solo7773 ▴ 90

I think "nMajor" may be the ploidy after variation. Is this right?

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