Question: SRA prefetch error
1
gravatar for madhuri186.sg
4.4 years ago by
madhuri186.sg10 wrote:

prefetch.. command not found, prefetch is continuously throwing this error. I want to prefetch a dataset from SRA

sra • 3.1k views
ADD COMMENTlink modified 4.4 years ago by GenoMax92k • written 4.4 years ago by madhuri186.sg10
1

Are you in the directory where the prefetch program is present? You could then run it as ./prefetch or if you are somewhere else then by providing full path to that executable as /path_to/prefetch (where path_to part is a real directory on your computer.

ADD REPLYlink modified 4.4 years ago • written 4.4 years ago by GenoMax92k

Try updating from here. Version 2.1.7 does not have prefetch.

ADD REPLYlink modified 4.3 years ago • written 4.3 years ago by Satyajeet Khare1.6k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1691 users visited in the last hour