Active site Prediction

Question

[ashamscsoft]

Is there any active site prediction tools available in online which predicts accurately, the active site in a protein. Kindly anyone help please

Answer 1

[Mo]

Sometime you don't need to ask question but use google. for example this website http://www.scfbio-iitd.res.in/dock/ActiveSite.jsp . COFACTOR will take the predicted pdb as input and has been ranked as the best server for function prediction in CASP9 http://zhanglab.ccmb.med.umich.edu/COFACTOR/

see also COACH, a metaserver for ligand binding site predictions (includes COFACTOR, FINDSITE and ConCavity) http://zhanglab.ccmb.med.umich.edu/COACH/

CASTp server : http://sts.bioe.uic.edu/castp/calculation.php