Question: R package for sequence homology
0
gravatar for floris.barthel
3.1 years ago by
floris.barthel40 wrote:

I'm looking for an R package that can calculate sequence homology between two sequences, identical to what this online program does: http://fasta.bioch.virginia.edu/fasta_www2/fasta_www.cgi?rm=shuffle

I've been searching around but havent had any luck. Can anyone give any pointers?

prfx prss sequence homology • 1.3k views
ADD COMMENTlink written 3.1 years ago by floris.barthel40

Have you already looked at biostrings ? (May be not exactly same as shuffle)

ADD REPLYlink written 3.1 years ago by poisonAlien2.8k
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