How do I find the haplotype info from
1000 genomes states that their data released from phase 3 are all phased. But when I use the browser to find SNPs, I could not find much haplotype info of any of the SNPs that I am looking for
MacAurther Lab from the Broad Institute stated that they were working on providing haplotype info for data in
ExAC. But as of now, I haven't seen any release that addresses the haplotype info.
If I have a handful of SNPs and would like to know in the population if any of them co-segregate in the same haplotype with any other known SNPs, how do I go about them without going through the whole VCF? Or is there any tool that can help me search for that info?
Thanks a lot.