Visualisation of clusters produced by mothur
0
0
Entering edit mode
5.3 years ago
khorms ▴ 210

Hi all, I have a set of bacterial organisms which 16S rRNA genes are clusterized by mothur. I've got the output of a clusterization in the form of a mothur list file. I want to visualise it the same way which is usually used for hierarchical clustering visualization:

enter image description here

How can I do it? Thank you!

mothur clustering visualisation qiime • 1.9k views
ADD COMMENT
0
Entering edit mode

The figure you linked errors with "404 Not found".

ADD REPLY
0
Entering edit mode

Correct me if I'm wrong, but your don't have any distance values in that file. Without such information, how would you go about doing hierarchical clustering..

ADD REPLY

Login before adding your answer.

Traffic: 947 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6