Question: Visualisation of clusters produced by mothur
gravatar for khorms
3.6 years ago by
khorms50 wrote:

Hi all, I have a set of bacterial organisms which 16S rRNA genes are clusterized by mothur. I've got the output of a clusterization in the form of a mothur list file. I want to visualise it the same way which is usually used for hierarchical clustering visualization:

enter image description here

How can I do it? Thank you!

ADD COMMENTlink modified 4 months ago by h.mon29k • written 3.6 years ago by khorms50

The figure you linked errors with "404 Not found".

ADD REPLYlink written 4 months ago by h.mon29k

Correct me if I'm wrong, but your don't have any distance values in that file. Without such information, how would you go about doing hierarchical clustering..

ADD REPLYlink modified 4 months ago • written 4 months ago by 5heikki8.6k
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