Somatic mutations database with corresponding bam files
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7.8 years ago
Rad ▴ 810

Hello there

I was wondering if someone could point to a resource where we can download validated somatic mutations as well as their corresponding alignments (bam files)

I found several repositories and databases (COSMIC etc ..) but as far as I know they don't offer location where to get the original data that served to get the mutations.

Thanks

Rad

somatic mutation bam variant • 1.8k views
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any input on this question is more than welcome

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Editing your original post provides a "bump" so it can reappear on the main page. You do not need to add a fake answer.

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what ? I didn't add an answer so that the post reappear on the main page, I just wanted to refresh the question for some help what makes you think that ?

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You added the

any input on this question is more than welcome

post above as an answer (perhaps not intentionally, but that is how it appeared on the site). I moved it to a comment against your original post.

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Ok sorry for that, wasn't my intention, not a frequent user

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How about checking the European Nucleotide Archive (ENA) or European Variation Archive (EVA)? The latter is looking for a wish list from users, so you may want to fill out their 2-min survey.

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