Question: Integrating WGS and RNA-seq data
0
gravatar for halo22
3.9 years ago by
halo22140
Indianapolis, IN
halo22140 wrote:

Are there any studies or reference papers that has done a integration of WGS and RNA-seq data? I am fairly new to RNA-seq and trying to understand how to correlate WGS and RNA-seq results.

rna-seq next-gen genome • 1.9k views
ADD COMMENTlink modified 3 months ago by biosys0 • written 3.9 years ago by halo22140
4
gravatar for natasha.sernova
3.9 years ago by
natasha.sernova3.7k
natasha.sernova3.7k wrote:

A very recent gene-fusion discovery paper:

INTEGRATE: Gene fusion discovery using whole genome and transcriptome data

http://genome.cshlp.org/content/early/2015/11/10/gr.186114.114

And another one:

QuickRNASeq lifts large-scale RNA-seq data analyses to the next level of automation and interactive visualization

http://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-015-2356-9

ADD COMMENTlink modified 3.9 years ago • written 3.9 years ago by natasha.sernova3.7k

I was wondering if there are new updates regarding WGS and RNA-seq Data integration (tools and best pipelines etc).

ADD REPLYlink written 3 months ago by biosys0
0
gravatar for biosys
3 months ago by
biosys0
biosys0 wrote:

I was wondering if there are new updates regarding WGS and RNA-seq Data integration (tools and best pipelines etc).

ADD COMMENTlink written 3 months ago by biosys0
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