where to get phiX annotation data?
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7.7 years ago
Bioblazer ▴ 50

I have phi X viral genome de novo assembled contig, I want to compare the de novo assembled contig annotation with already existing annotation file. Can anybody please tell me where to get (which sites to get) the annotation files details for phi X reference genome deposited in database.

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7.7 years ago
GenoMax 141k

You will find phiX sequence/index/annotation bundle at iGenomes. Control phiX provided by Illumina (which is what you may have assembled) is slightly different than the NCBI's version. Both are available at iGenomes.

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