Question

pairwise alignment with multiple sequences in a fasta file.

0

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7.7 years ago

kanshenglong • 0

Hi all, I need a script aligns the sequences in a fasta file to a reference sequence.

  Best!

alignment • 2.5k views

ADD COMMENT • link updated 7.7 years ago by GenoMax 141k • written 7.7 years ago by kanshenglong • 0

score 4 · Accepted Answer · 2016-08-04

4

Entering edit mode

7.7 years ago

GenoMax 141k

Take your pick: https://omictools.com/multiple-sequence-alignment-category
Clustal, T-Coffee, MUSCLE, MAFTT, MEGA are good options.

ADD COMMENT • link 7.7 years ago by GenoMax 141k