Question: How to filter out variants based on the population frequency
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3.2 years ago by
United States
bioinforesearchquestions260 wrote:

Hi All,

I have been asked to filter out variants based on the population frequency. In order to do this, should I use "AF-Allele Frequency" of my sample?

What is the significance of annotating VCF file with the allele frequency of ASN, AMR, AFR and EUR?

ADD COMMENTlink modified 2.2 years ago by shahimahdi570 • written 3.2 years ago by bioinforesearchquestions260
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gravatar for shahimahdi57
2.2 years ago by
shahimahdi570 wrote:

helo my friends,my english not very good but now i asswer you:we have very toos or site that you can use of them to filtering your data(vcf),for example population frequency,structure based,prediction,and evidence.and in population frequncy based you can use of 1000 genome project,NHLBI cohort and HAPMAP project....I hope I've been right my ansswer

ADD COMMENTlink written 2.2 years ago by shahimahdi570
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