I don't understand what are the reference and the alternative alleles in the vcf file format. Having a variant with reference='A' and alternative allele='C' and a genotype='0/0' means that the individual is 'A/A'? But in this case how the 'C' was found if the reference is 'A' and the individual is 'A/A'?
Question: VCF reference and alternative allele
2.6 years ago by
onemoreuser • 10
onemoreuser • 10 wrote:
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