Entering edit mode
8.1 years ago
sviatoslav.kendall
▴
920
I'm writing a script that will identify loss of function mutations in a SNPEFF-annotated MAF file containing point mutations, indels or, in some cases, both.
So far, I've been doing this is by typing up a list of every Sequence Ontology value that indicates a loss of function:
stop_gained start_lost etc
But I suspect this has already been done and wonder if someone can point me if the right direction of finding such a list.