Tutorial: resolving error of sspace_standard
gravatar for reza
3.8 years ago by
reza220 wrote:

hi everyone

if you get below error when you run SSPACE_Standard

Can't locate getopts.pl in @INC (@INC contains: /cygdrive/d/SSPACE/dotlib/ /usr/ lib/perl5/site_perl/5.22/x86_64-cygwin-threads /usr/lib/perl5/site_perl/5.22 /us r/lib/perl5/vendor_perl/5.22/x86_64-cygwin-threads /usr/lib/perl5/vendor_perl/5. 22 /usr/lib/perl5/5.22/x86_64-cygwin-threads /usr/lib/perl5/5.22 .) at SSPACE_St andard_v3.0.pl line 124.

you can download getopts.pl from here and replace it in directory that your main program (SSPACE_Standard) is there and then try ./sspace_standard_vxxx.pl

The problem was solved?

ADD COMMENTlink written 3.8 years ago by reza220

Thanks for the help

ADD REPLYlink written 3.8 years ago by Medhat8.7k

This worked for me too. Thanks !

ADD REPLYlink written 23 months ago by lokraj200380

Please i have another question , i don't know how to do library preparation in spades , i didn't undrestand it , please help

ADD REPLYlink written 8 weeks ago by Bioinfo20
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