Tutorial:resolving error of sspace_standard

Question

[reza]

hi everyone

if you get below error when you run SSPACE_Standard

Can't locate getopts.pl in @INC (@INC contains: /cygdrive/d/SSPACE/dotlib/ /usr/                                                                                                                lib/perl5/site_perl/5.22/x86_64-cygwin-threads /usr/lib/perl5/site_perl/5.22 /us                                                                                                                r/lib/perl5/vendor_perl/5.22/x86_64-cygwin-threads /usr/lib/perl5/vendor_perl/5.                                                                                                                22 /usr/lib/perl5/5.22/x86_64-cygwin-threads /usr/lib/perl5/5.22 .) at SSPACE_St                                                                                                                andard_v3.0.pl line 124.

you can download getopts.pl from here and replace it in directory that your main program (SSPACE_Standard) is there and then try ./sspace_standard_vxxx.pl

The problem was solved?

[Medhat]

Thanks for the help

[lokraj2003]

This worked for me too. Thanks !

[Bioinfo]

Please i have another question , i don't know how to do library preparation in spades , i didn't undrestand it , please help