HI , I am doing some tumor research. I used GATK to call somatic SNV . now I have the tumor bam file and VCF file . I wanna extract all reads suggested every SNV record from that VCF file . So how to complete that goal with using python ??
Question: how to extract all reads covered at the somatic SNP site that from a BAM file in VCF file with using python?
2.7 years ago by
winter_li • 40
winter_li • 40 wrote:
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