I want to create a script that lets users get pdfs of a bunch of regions from the UCSC genome browser.
I want to allow users to give custom bigwigs as arguments on the command line and have them displayed by UCSC. Problem is, the bigwigs need to be stored online somewhere. Therefore I want to upload them programmatically for the user.
Are there services that lets me do this easily, preferably with a java library (I am using clojure)?