Question: Cuffflinks installation problem
0
gravatar for sukesh1411
2.7 years ago by
sukesh141130
South Africa
sukesh141130 wrote:

Dear Sir,

I am trying to install cufflinks-2.2.1,

i have downloaded and installed boost version 1_55_0 , samtools 0.1.19

cufflinks configured properly

I am facing problem with make

Make error :

Makefile:1418: recipe for target 'abundances.o' failed make[2]: * [abundances.o] Error 1 make[2]: Leaving directory '/home/rnaseq/cufflinks-2.2.1/src' Makefile:258: recipe for target 'all-recursive' failed make[1]: [all-recursive] Error 1 make[1]: Leaving directory '/home/rnaseq/cufflinks-2.2.1' Makefile:196: recipe for target 'all' failed make: ** [all] Error 2

Please, help me in installing cufflinks

rna-seq • 1.2k views
ADD COMMENTlink modified 2.7 years ago • written 2.7 years ago by sukesh141130
1
gravatar for Jeffin Rockey
2.7 years ago by
Jeffin Rockey1.1k
Karimannoor
Jeffin Rockey1.1k wrote:

If you are not particular about building, the below should help

wget -c http://cole-trapnell-lab.github.io/cufflinks/assets/downloads/cufflinks-2.2.1.Linux_x86_64.tar.gz

tar -xvzf cufflinks-2.2.1.Linux_x86_64.tar.gz

export PATH="/home/rnaseq/cufflinks-2.2.1.Linux_x86_64":$PATH
ADD COMMENTlink modified 2.7 years ago by genomax67k • written 2.7 years ago by Jeffin Rockey1.1k
0
gravatar for sukesh1411
2.7 years ago by
sukesh141130
South Africa
sukesh141130 wrote:

Thankyou Sir ! It worked :)

ADD COMMENTlink written 2.7 years ago by sukesh141130

Hi Sukesh1411, please use ADD COMMENT to reply to an earlier answer, as such these threads remain logically structured and easy to follow. Thanks!

ADD REPLYlink written 2.7 years ago by WouterDeCoster38k
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