Question: Obtaining beads number from MethylSet (minfi)
gravatar for ciemanek
16 months ago by
The Netherlands/Amsterdam
ciemanek20 wrote:

Is there any way to get the information about beads number contributing in signal for probe from MethylSet (minfi package)? I know it is possible for data in shape of RGChannelSetExtended by slot: rgSet@assayData$NBeads, but I want to remove probes with less than 3 beads contributing and I perform few steps before that which requires to operate on MethylSet.

I would appreciate any suggestion.

Kind regards, Agata

R illumina methylation minfi 450k • 476 views
ADD COMMENTlink written 16 months ago by ciemanek20
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 611 users visited in the last hour