Question: ROD file for GATK's Haplotype Caller
gravatar for Bioinformatician_in_trouble
2.7 years ago by

Hey guys,

I wanted to use GATK's HAplotype caller tool in my local instance of GALAXY, however I need to submit a ROD file. Please help me with what is ROD file and where can I obtain it from?My reference genome has been obtained from UCSC genome browser. Waiting for response as I cannot proceed with my analysis without uploading a ROD file.

Thank you in advance for your help.

snp next-gen • 544 views
ADD COMMENTlink written 2.7 years ago by Bioinformatician_in_trouble10
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