Please take a look at MicroScope: https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-016-1260-x
MicroScope is a user-friendly ChIP-seq and RNA-seq software suite for the interactive visualization and analysis of genomic data, including integrated features to support differential expression analysis, interactive heatmap production, principal component analysis, gene ontology analysis, and dynamic network visualization.
To use MicroScope, please visit: http://microscopebioinformatics.org
For developers, MicroScope source code is available at: https://github.com/Bohdan-Khomtchouk/Microscope
MicroScope is free software (released under the GNU General Public License) and you are welcome (and encouraged) to contribute to it. Please submit any bug reports here: https://github.com/Bohdan-Khomtchouk/Microscope/issues.
Please feel free to get in touch via Github, or here on Biostars.