How to count exon numbers from a GFF format file
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7.6 years ago
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Hello ! I need your help! This links shows my GFF format file :https://github.com/LTMabel/cosera/blob/master/Ptrichocarpa.thin.gff I am a undergraduate, new in perl, and I want to learn Bioinformatics on my postgraduate. I want to ask for a perl script , this perl script contains sequence length, exon numbers, whether in plus strand or minus strand. Thank you very much!

sequence perl GFF format • 2.4k views
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Did you try any thing by yourself first? or show the people here the code that you are trying to write, then they can help

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https://github.com/LTMabel/cosera/blob/master/count_cds_num.pl I think it is very difficult for me ,because I cannot even found similar script......or more information about GFF format.

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