Sanger sequencing data analysis
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5.7 years ago

Free software which you recommend for sanger sequencing data analysis. best regards

sequence Tool • 1.9k views
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Hi Adrian - could you be a little more specific? What kind of data analysis? Also i've changed this from Tool to Question as Tool is used for people releasing new tools rather than asking for them :)

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Also, which platform? illumine, pacbio, oxford etc. Next Generation Sequencing ?

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Sanger sequencing. Besides the lack of information in the question, this part seems rather clear.

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Is Sanger Sequencing and i need EST Analysis tools

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Please use ADD COMMENT and ADD REPLY to answer to earlier posts, as such this thread remains logically structured and easy to follow.

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Hi, I am planning to use NovoSNP for SNP detection. However, I faced some challenges inserting the refseq. Could you kindly advice me how to perform the run ?

Thank you.

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I faced some challenges inserting the refseq

Can you be more specific? With this information I don't know what goes wrong. We usually download a .embl file from ensembl for our gene of interest.

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5.7 years ago

We use novoSNP (developed in-house as well).

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The novoSNP URL appears to be dead. Is there an updated one?

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I'm sorry for the delay, but I have now changed the link to its updated location.

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2.6 years ago
trausch ★ 1.8k

We recently developed Tracy to analyze Sanger sequencing data, works from the command-line and using web applications.

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