Question: How to export taxonomies from MEGAN (input is BLAST table)
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gravatar for yue.hu
14 months ago by
yue.hu30
yue.hu30 wrote:

Hi, I am new to MEGAN. My purpose is to annotate a fasta file.
I have done a BLAST search for the sequences in my fasta file against the NCBI reference sequence database, and I imported the BLAST output table together with NCBI reference sequence database taxa map (include NCBI accessory number and taxa info) to MEGAN. It is easy to see which species were found in my fasta file with MEGAN, but I just cannot find a way to export the taxonomy information (after LCA process) together with my fasta seq_id. Could any of you tell me how could I export taxa together with my fasta seq_id?

blast sequence alignment • 540 views
ADD COMMENTlink written 14 months ago by yue.hu30
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