Suggestions for Visualization of Domain Architecture Evolution, Through Phylogenetic Tree
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4.8 years ago
hanchen1996 ▴ 10

I am looking at ways to visualize the evolutionary history of domain architecture

I have read a few papers that do this:

What other tools do people normally use?

visualization domain phylogenetic tree • 1.2k views
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4.8 years ago
natasha.sernova ★ 3.8k

See these articles:

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2794708/

The Evolutionary History of Protein Domains Viewed by Species Phylogeny

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702901/

FunTree: advances in a resource for exploring and contextualising protein function evolution

http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0008378

The Evolutionary History of Protein Domains Viewed by Species Phylogeny

http://nar.oxfordjournals.org/content/34/suppl_2/W104.abstract

TreeDomViewer: a tool for the visualization of phylogeny and protein domain structure

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I've looked over some, but one of them is new. Thanks

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