Hello everyone!
I am working on a gene with 5 different transcripts.
2 or 3 are quite similar as they differ perhaps in 1-2 amino acids. Apart from this, they differ significantly in the 5' UTR.
Maybe a silly question but any idea if, how and where I could find which transcript(s) is/are expressed in the brain?
Thank you in advance,
Konstantinos
Check out the Allen Brain Atlas. They have some microarray datasets that might have transcript-level metrics. You might also get lucky and find that some of the in situ probes are transcript-specific, though I wouldn't hold my breath there.