Question: Mapping to protein networks
0
gravatar for khorms
2.6 years ago by
khorms30
Moscow
khorms30 wrote:

I have a set of human proteins and I want to map them at protein network in order to know, whether they interact which each other. Which servers are the most useful for this purpose? Thank you!

mapping protein network • 737 views
ADD COMMENTlink modified 2.6 years ago by ssv.bio180 • written 2.6 years ago by khorms30
1

String is an important resource for that http://string-db.org/

ADD REPLYlink written 2.6 years ago by microfuge1.1k
2
gravatar for ssv.bio
2.6 years ago by
ssv.bio180
ssv.bio180 wrote:

CPDB, IPA, Visant in addition to string. WGCNA, BIONET, MEGENA, Connectivity map, for detecting functional association if you have expression data.

ADD COMMENTlink modified 2.6 years ago • written 2.6 years ago by ssv.bio180

It would be best to include links for programs you are mentioning in the post.

ADD REPLYlink written 2.6 years ago by genomax67k

Are there any good publications about comparison of these methods? By the way, it looks like IPA is not a free product, is it?

ADD REPLYlink written 2.6 years ago by khorms30
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