Question: What does the less-than symbol "<" mean when it's contained in the read_bases section of a pileup file?
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gravatar for procrastrjf
3.2 years ago by
procrastrjf0 wrote:

Pileup format I'm using

Here's the line in my data that's confusing me:

chr1 12284 N 1 < 5

I'm not sure how to deal with it? Also, if anyone knows where good documentation of .pileup format is I would love to know. I can't find good .pileup documentation online.

sequence • 954 views
ADD COMMENTlink modified 3.2 years ago by genomax75k • written 3.2 years ago by procrastrjf0
1

See if this would help: Pileup format parsing difficulty

ADD REPLYlink modified 3.2 years ago • written 3.2 years ago by genomax75k
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