Question: Structure Prediction, ab initio modeling
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gravatar for ashamscsoft
2.7 years ago by
ashamscsoft10
ashamscsoft10 wrote:

I would like to know which will be the best server or tool, to predict protein structure by ab initio modeling. Kindly anyone help with this

ADD COMMENTlink written 2.7 years ago by ashamscsoft10

You can explore Rosetta (https://www.rosettacommons.org/) or Phyre (http://www.sbg.bio.ic.ac.uk/phyre2/html/page.cgi?id=index).

Thanks

Priyabrata

Persistent LABS

ADD REPLYlink modified 2.7 years ago • written 2.7 years ago by Persistent LABS740

But how far the structure will be reliable?

ADD REPLYlink written 2.7 years ago by ashamscsoft10

Reliability decreases as the sequence homology decreases. But u can rely on Rosetta than Phyre because Phyre is threading based structural modeling while Rosetta is completely ab-initio based.

ADD REPLYlink written 2.7 years ago by Persistent LABS740
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