Question: How to compare the alignment quality of two or more homology modelling software
gravatar for roonymoonlight
4.4 years ago by
roonymoonlight40 wrote:


I am generating a high quality model by homology modeling method. But I am looking at alignment from different software , alignment between my target sequences from blast and other alignmet from HHpred. saw I want to compare the quality of the two alignment , any suggestion how can I do that ?

alignment • 938 views
ADD COMMENTlink modified 4.4 years ago by GenoMax96k • written 4.4 years ago by roonymoonlight40

t-coffee provides good alignment comparison methods for structural alignments here

ADD REPLYlink written 4.4 years ago by microfuge1.9k
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