Question: How to compare the alignment quality of two or more homology modelling software
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gravatar for roonymoonlight
3.1 years ago by
roonymoonlight40 wrote:

Hi

I am generating a high quality model by homology modeling method. But I am looking at alignment from different software , alignment between my target sequences from blast and other alignmet from HHpred. saw I want to compare the quality of the two alignment , any suggestion how can I do that ?

alignment • 795 views
ADD COMMENTlink modified 3.1 years ago by genomax74k • written 3.1 years ago by roonymoonlight40
1

t-coffee provides good alignment comparison methods for structural alignments here

ADD REPLYlink written 3.1 years ago by microfuge1.4k
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