What's the best online website or tool for viral genome annotation?
Maybe it is better to edit your question title to "Viral Genome Annotation / Website".
Dear Farbod,I changed title.Thanks for your help.
Thank you for your attention, it helps people to answer you more accurately and others to find their answer.
Ghorbanat and good luck!
Farbod jan , I did map reads (Case / Control) to Gallus Gallus genome Fasta file (iGenome) by Geneious software.The software produce31 map files.When I want to calculate expression level , but I got the following message : You have to use ref file with mRNA annotation" Please help me to select correct ref file.Thanks.
Have you tried VIGOR or NCBI viral genomes ?
and in this post there are some sharing about personal experiences .
Thanks,i did with VIGOR