Question

Is miRNA and mRNA data from GDC (TCGA) from same patient samples?

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7.5 years ago

hAjmal ▴ 50

Hi All, I am sorry if this question has already been asked or answered, Can anyone please tell me, if the miRNA and mRNA data from TCGA (Now GDC) from same patient or from different patients?

RNA-Seq miRNA TCGA GDC • 1.9k views

ADD COMMENT • link updated 7.5 years ago by Bill Wysocki ▴ 100 • written 7.5 years ago by hAjmal ▴ 50

score 3 · Accepted Answer · 2016-10-17

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7.5 years ago

Bill Wysocki ▴ 100

Hello,

Not all of the miRNA-Seq or mRNA-Seq data have corresponding mRNA-Seq and miRNA-Seq data respectively. However, over 9,800 (out of 11,353) patients from TCGA have both types of data processed by the GDC.

-Bill - GDC User Services Team

ADD COMMENT • link 7.5 years ago by Bill Wysocki ▴ 100

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Thank you for your response.

ADD REPLY • link 7.5 years ago by hAjmal ▴ 50