Question: How to creat mutation profiles from TCGA MAFs
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3.4 years ago by
wt.kouxiangtang0 wrote:

Hi all,

I met a problem when I read the paper :https://www.ncbi.nlm.nih.gov/pubmed/?term=27333808

The authers use mutation profiles to build a method for identifying cancer driver genes and the data is from TCGA. As far as I know, the mutation files in TCGA are MAF files. What should I do to change the MAF into a mutation profile with each row represents a gene and each column represents a patient.

Thank you!

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mutation tcga profile • 1.1k views
ADD COMMENTlink written 3.4 years ago by wt.kouxiangtang0
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