Question: Multiple alignment and phylogenetic tree resources
0
gravatar for Picasa
3.6 years ago by
Picasa530
Picasa530 wrote:

Hi,

I am totally beginner in this domain.

Do you have some resources or tutorial that can help me to analyse some relationship between species from multiple alignment to phylogenetic tree inference ?

msa phylogenie • 856 views
ADD COMMENTlink modified 3.6 years ago by confusedious420 • written 3.6 years ago by Picasa530
3
gravatar for Medhat
3.6 years ago by
Medhat8.7k
Texas
Medhat8.7k wrote:

Their is a nice book for complete beginners

Phylogenetic Trees Made Easy: A How-to Manual

Multiple Alignment and Phylogenetic trees

here you can find some important definitions

also here is some papers that will give you more insight .

Choosing a Method for Phylogenetic Prediction

Robust Phylogenetic Analysis For The Non-Specialist

This is just appetizer more can be found

Good luck :)

ADD COMMENTlink modified 3.6 years ago • written 3.6 years ago by Medhat8.7k

Thanks a lot for your support.

ADD REPLYlink written 3.6 years ago by Picasa530
0
gravatar for confusedious
3.6 years ago by
confusedious420
Australia
confusedious420 wrote:

Starting with some nice, easy to use software is good too.

If you are on a limited budget, then MEGA offers some nice ways to explore your data. I had the pleasure of attending a talk by the developers of MEGA at the SMBE conference earlier this year - despite it's ease of use, the developers really do care about getting things right.

If you have money to spare, then Geneious is absolutely wonderful.

I used these as an early student of phylogenetics research, and have recommended both to other students and found that they learned a lot from playing with them.

ADD COMMENTlink written 3.6 years ago by confusedious420

MEGA will do great work, I used it before

ADD REPLYlink written 3.6 years ago by Medhat8.7k
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