construct a co-expression network of coding-noncoding genes
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4.5 years ago

Hi All, I have datasets derived from RNAseq experiments,I did differential expression for coding and lncoding RNA. I want to construct a co-expression network of these coding-noncoding genes,what should I do?Can you recommend software?

I should construct a co-expression network for each experiment OR I can select special genes and lncRNA from all of experiments(I mean after doing meta analysis ,set filter and choose key genes) for constructing a co-expression network ?

RNA-Seq network • 1.3k views
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try WGCNA

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