I am trying to develop a pipeline that will align a large number of subsequences of a certain length surrounding SNPs to the human genome, and then translate those subsequences to amino acid representations. I figure this should be straightforward using biopython and/or standard tools. However, I am not sure what the best way to do this is, and was wondering if I could get some insight into some of people's favorite tools.
Question: python tools for aligning and translating subsequences containing SNPs
2.4 years ago by
vdjonsson • 0
vdjonsson • 0 wrote:
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