Does TCGA has RNA-seq data of healthy sample colon tissue? If it has , how can I get then?

Question

[baiguihuajl]

Does TCGA has RNA-seq data of healthy sample colon tissue? If it has , how can I get then?

Answer 1

[Ron]

GTEX has around ~80 RNAseq samples on Colon Normal . They are in sra format and can be downloaded using sra toolkit.

Answer 2

[Shicheng Guo]

Yes. TCGA have large number normal colon (adjacent cancer tissue =?= normal) RNA-seq data.

How to download: Protocol To Downlad TCGA Data From GDC

[baiguihuajl]

I have found RNA-seq data of normal colon tissue sample from cancer patient, I wonder if TCGA has the sample from healthy people. Thank you.