Question: Gene Expression From Illumina HT-12: How to get GO Terms?
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gravatar for questionaire
2.4 years ago by
questionaire0 wrote:

Hello All:

I have outputs in IDATs from Illumina HT-12. I was wondering if there is any R tools that can read the IDATs into R and do differential expression then get me the GO Terms? Thank you in advance.

ADD COMMENTlink modified 2.4 years ago by Benn6.6k • written 2.4 years ago by questionaire0

you can use this script for idat processing and differential expression analysis but for GO analysis you will have to find other sources.

ADD REPLYlink written 2.4 years ago by poisonAlien2.7k

Hello PoisonAlien:

I have used that script before the generate differential expression analysis. I was wondering if you know of any R packages that can get me GO Analysis? Thank you.

ADD REPLYlink written 2.4 years ago by questionaire0
0
gravatar for Benn
2.4 years ago by
Benn6.6k
Netherlands
Benn6.6k wrote:

Probably asked and answered before:

Best Practice Approach In R To Processing Illumina Microarrays For Rna Profiling

ADD COMMENTlink written 2.4 years ago by Benn6.6k
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