Can I compare the e-value results across different Blast program?

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7.5 years ago

qingxiangg ▴ 40

Hi everyone,

I'm trying to compare e-values coming from different Blast program exponentially.

I use the same subject database (All-nucl.), only different queries (some are proteins, some are nucl.)

For example, I got e-75 for blastn and e-90 for tblastn for the same subject sequence, then can I say that this subject sequence is more related to e-90?

Because the equation of blastn and tblastn are different in K. ( enter image description here )

Can anyone help me with this?

Thanks a lot

blast • 2.0k views

ADD COMMENT • link 7.5 years ago by qingxiangg ▴ 40

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This thread discusses BLAST evalue comparison.

ADD REPLY • link 7.5 years ago by Sej Modha 5.3k

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Thanks Modha! I've seen that post before and in fact the problem haven't been solved. Thanks anyway!

ADD REPLY • link 7.4 years ago by qingxiangg ▴ 40

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