Closed:Is there any option in annotatePEak (chipseeker) to normalize the reads?

Question

[Lila M]

Hi everyone,

I'm carrying out some ChIP seq analysis. After peak calling with MACS2, I've used annotatepeak (Chipseeker), but regarding the output, I have some questions, that I hope you will answer: -I assume that the column under the name "width" is the read depth for each peak -Are these reads normalized? If the answer is not, how I can normalized them?

Thank you very much in advance

Best