Question: SGA Assembler Indexing Error
gravatar for Abdul Rafay Khan
4.2 years ago by
Karachi, PK
Abdul Rafay Khan1.1k wrote:

Trying to index fastq reads but getting error Already preprocess fastq file using sga preprocess READS > out.fastq command.

sga index datafastq/humanUpairedSGA.fastq

Building index for /home/rafay/datafastq/humanUpairedSGA.fastq in memory using SAIS
initializing SA
terminate called after throwing an instance of 'std::bad_alloc'
  what():  std::bad_alloc
denovo ngs assembly • 1.1k views
ADD COMMENTlink written 4.2 years ago by Abdul Rafay Khan1.1k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1643 users visited in the last hour