Question: SGA Assembler Indexing Error
2
gravatar for Abdul Rafay Khan
4.2 years ago by
Karachi, PK
Abdul Rafay Khan1.1k wrote:

Trying to index fastq reads but getting error Already preprocess fastq file using sga preprocess READS > out.fastq command.

sga index datafastq/humanUpairedSGA.fastq

Building index for /home/rafay/datafastq/humanUpairedSGA.fastq in memory using SAIS
initializing SA
terminate called after throwing an instance of 'std::bad_alloc'
  what():  std::bad_alloc
denovo ngs assembly • 1.1k views
ADD COMMENTlink written 4.2 years ago by Abdul Rafay Khan1.1k
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