I am Deepak, working on transcriptomics of asian cat fish. I have done de novo assembly of reads obtained through illumina sequencing. I have done SNP calling through VDAP-GUI usig the assembled contigs as the reference and i got almost 1,39,812 SNPs. Because refernce genome of asian cat fish is not yet available in public domain, so could i annotate these SNP? if yes then how? Please help me!!!!!!!
Question: SNP calling in de novo transcriptomics
4.1 years ago by
deepak.fbt-pa4-02 • 0 wrote:
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