I am trying to convert sra from PRJNA282735 dataset to fastq and I am getting following error...
fastq-dump.2.1.7 fatal: SIGNAL - Segmentation fault
My fastq-dump command is
fastq-dump --split-3 SRR2016445.sra -O SRR2016445
I am not able to find similar error elsewhere. The ENA page for some samples of this dataset has three files per SRX experiment (e.g. SRR2016445.fastq, SRR2016445_1.fastq and SRR2016445_2.fastq).
This is unusual for me as I usually get one or two SRR runs per experiment (depending on single end paired end) but never 3. I am wondering if this is the reason for getting errors.
Anybody with similar experience?