I would like to cluster sequences based on 99% identity, and have been using usearch. However, I would like the clustering process to ignore a particular region on the nucleotide sequences that is very variable. What tool can I use to do this clustering where I can specify it to ignore nucleotide/amino acid differences in a certain region?
Question: Clustering sequences based on identity, but ignoring a particular region on the sequences
2.7 years ago by
Mac • 10
Mac • 10 wrote:
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