How to get one several fasts files in one text file from Blast+
1
0
Entering edit mode
5.0 years ago
Mohamed ▴ 70

Dear Biostars,

I'm learning standalone Blast+. I installed it on windows and wish to know what is the command line to extract the best or top 5 sequences (for example) as fast sequences to get them in one text output file.

Thanks a lot. Mohamed

Blast+ standalone • 1.0k views
ADD COMMENT
0
Entering edit mode

Try using -max_target_seqs 5 as a parameter

ADD REPLY
0
Entering edit mode

Many thanks biofalconch. If I may ask if there is a website for completely beginners for Blast+. Anyway, many thanks.

ADD REPLY
0
Entering edit mode
5.0 years ago
Mohamed ▴ 70

Many thanks biofalconch. If I may ask if there is a website for completely beginners for Blast+. Anyway, many thanks.

ADD COMMENT

Login before adding your answer.

Traffic: 2324 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6