How To Convert The Bed File To Ped File
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14.1 years ago
Austinlew ▴ 310

I have got a BED file (used in Plink and with .bim and .fam file) which contains Affy 500K data, I want to convert it back to PED file with map file. Is there anyone how to do this task? Thank you very much !

bed ped • 48k views
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Thanks a lot , I will try it right now!

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For future reference, best to reply with thanks in the comments, not as an additional answer to a question :)

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14.1 years ago
jvijai ★ 1.2k
plink --bfile filename --recode --tab --out myfavpedfile

plink

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I got an error which shown as Error: --export requires at least one output format. (Did you forget 'ped' or'vcf'?)

So I added export parameter ./plink2 --bfile filename --recode --tab --out myfavpedfile --export ped but also got the error Error: Duplicate --export flag.

Do you got any solution for this stiuation?

Thank you

JK

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