Protein - Ligand interaction listing
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5.5 years ago
arronar ▴ 270

Hi!

I was wondering if you know any program/script for linux or not, that can calculate the interactions between Ligand and protein from a pdb file. When I'm saying interactions i mean, h-bonds, aromatic interactions, hydrophobic bonds etc.

Thanks

pdb interactions • 1.7k views
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Entering edit mode
6 months ago

Hey,

You could try PLIP from TU Dresden from this link; https://plip-tool.biotec.tu-dresden.de/plip-web/plip/index They also have a downloadable version for batch operations. GL

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