How can I retrieve the info to recreate this figure for my own data?
1
1
Entering edit mode
7.3 years ago
Sadia ▴ 60

Hi, I'd like to recreate the following figure for my data. I can think of multi-step, longer way to do it, but I wanted to ask if there is a program of tool that might help me create it more efficiently?

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4346130/bin/nihms619734f5.jpg "Each curve is the cumulative distribution of the distances from genes to the nearest AR binding sites.."

ChIP-Seq • 1.3k views
ADD COMMENT
3
Entering edit mode
7.3 years ago
Dan D 7.4k

Excel from the 2010 edition onward can accomplish something like your figure pretty easily.

There's also SigmaPlot, which is what I used before I became proficient with d3.js and matplotlib. This figure actually resembles a standard matplotlib product to me.

Tableau is great too, but probably overkill for this particular type of figure.

EDIT: OK, so you changed the subject line to make the question about the data, not the visualization. I recommend checking out bedtools closest.

ADD COMMENT

Login before adding your answer.

Traffic: 1814 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6