Question: How can I retrieve the info to recreate this figure for my own data?
1
gravatar for Sadia
2.8 years ago by
Sadia50
Sadia50 wrote:

Hi, I'd like to recreate the following figure for my data. I can think of multi-step, longer way to do it, but I wanted to ask if there is a program of tool that might help me create it more efficiently?

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4346130/bin/nihms619734f5.jpg "Each curve is the cumulative distribution of the distances from genes to the nearest AR binding sites.."

chip-seq • 642 views
ADD COMMENTlink modified 2.8 years ago by Dan D6.8k • written 2.8 years ago by Sadia50
3
gravatar for Dan D
2.8 years ago by
Dan D6.8k
Tennessee
Dan D6.8k wrote:

Excel from the 2010 edition onward can accomplish something like your figure pretty easily.

There's also SigmaPlot, which is what I used before I became proficient with d3.js and matplotlib. This figure actually resembles a standard matplotlib product to me.

Tableau is great too, but probably overkill for this particular type of figure.

EDIT: OK, so you changed the subject line to make the question about the data, not the visualization. I recommend checking out bedtools closest.

ADD COMMENTlink modified 2.8 years ago • written 2.8 years ago by Dan D6.8k
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