I am working on my first sequencing project. I have used Trinity to make de novo assemblies of RNA-Seq libraries for ~ 8 primate species, including human. I am trying to figure out how to annotate the human transcriptome and want to use BLAST. I was hoping someone could help me out with how to generate a blast database in UNIX for my human sample, and then BLAST the Trinity.fa transcriptome against it.
Thanks in advance.